Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ift88 ENSDARG00000027234

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Description

intraflagellar transport 88 homolog [Source:NCBI gene (formerly Entrezgene);Acc:321855]

Location

Chromosome 9: 21,365,043-21,383,489 reverse strand.

GRCz11:CM002893.2

About this gene

This gene has 5 transcripts (splice variants), 202 orthologues, 18 paralogues and is associated with 115 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000038923.8	ift88-201	2941	824aa	ENSDARP00000034047.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110943.5	ift88-202	3431	855aa	ENSDARP00000101727.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TWZ9	-
ENSDART00000188129.1	ift88-204	3386	840aa	ENSDARP00000150029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TWQ7	-
ENSDART00000193876.1	ift88-205	2388	795aa	ENSDARP00000155661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000132032.3	ift88-203	602	109aa	ENSDARP00000122577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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