Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: slc38a3a ENSDARG00000027065

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Description

solute carrier family 38 member 3a [Source:NCBI gene (formerly Entrezgene);Acc:100073328]

Gene Synonyms

zgc:165543

Location

Chromosome 11: 34,824,099-34,914,857 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000037017.9	slc38a3a-201	9940	521aa	ENSDARP00000034403.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000146944.3	slc38a3a-203	1920	510aa	ENSDARP00000118549.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000103157.4	slc38a3a-202	1453	189aa	ENSDARP00000093931.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLD2	-

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Summary

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