Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: nlrc5 ENSDARG00000024631

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Description

NLR family, CARD domain containing 5 [Source:NCBI gene (formerly Entrezgene);Acc:100535184]

Location

Chromosome 18: 17,624,295-17,657,802 forward strand.

GRCz11:CM002902.2

About this gene

This gene has 6 transcripts (splice variants), 10 orthologues and 372 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151865.3	nlrc5-202	6425	1746aa	ENSDARP00000126444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DYB6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000190408.1	nlrc5-205	6585	991aa	ENSDARP00000145244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000033762.9	nlrc5-201	6341	1718aa	ENSDARP00000035227.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000189204.1	nlrc5-204	6341	1718aa	ENSDARP00000146586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RJK5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000188894.1	nlrc5-203	6173	1662aa	ENSDARP00000153101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000193471.1	nlrc5-206	5984	1599aa	ENSDARP00000147191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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