Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: kcnn1b ENSDARG00000023546

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Description

potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:NCBI gene (formerly Entrezgene);Acc:570401]

Location

Chromosome 8: 13,244,371-13,315,567 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 4 transcripts (splice variants), 143 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014528.9	kcnn1b-201	1180	235aa	ENSDARP00000007813.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LY45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000132685.3	kcnn1b-202	1800	544aa	ENSDARP00000115554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000168635.2	kcnn1b-204	1644	547aa	ENSDARP00000130450.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IC13	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000142596.2	kcnn1b-203	1410	338aa	ENSDARP00000115684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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