Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: mcf2a ENSDARG00000022895

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Description

MCF.2 cell line derived transforming sequence [Source:HGNC Symbol;Acc:HGNC:6940]

Location

Chromosome 14: 32,440,639-32,503,363 reverse strand.

GRCz11:CM002898.2

About this gene

This gene has 4 transcripts (splice variants), 196 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034883.9	mcf2a-201	5149	1111aa	ENSDARP00000029313.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q4X6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180391.1	mcf2a-203	6769	811aa	ENSDARP00000148352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148830.2	mcf2a-202	568	183aa	ENSDARP00000124326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000186724.1	mcf2a-204	471	126aa	ENSDARP00000150853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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