Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: kctd9a ENSDARG00000021209

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Description

potassium channel tetramerization domain containing 9a [Source:NCBI gene (formerly Entrezgene);Acc:541442]

Location

Chromosome 8: 51,586,483-51,599,169 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 245 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000098263.5	kctd9a-201	1423	389aa	ENSDARP00000089035.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5M1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000134614.2	kctd9a-202	1389	385aa	ENSDARP00000116451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000175779.2	kctd9a-203	537	178aa	ENSDARP00000143965.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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