Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ptchd1 ENSDARG00000018066

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Description

patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]

Location

Chromosome 24: 25,347,503-25,364,775 reverse strand.

GRCz11:CM002908.2

About this gene

This gene has 2 transcripts (splice variants), 242 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186814.1	ptchd1-202	7468	887aa	ENSDARP00000153962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DYL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151915.2	ptchd1-201	5427	887aa	ENSDARP00000126544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DYL5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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