Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
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ID History
- Gene history

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Gene: tmem50a ENSDARG00000015757

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Description

transmembrane protein 50A [Source:NCBI gene (formerly Entrezgene);Acc:406850]

Location

Chromosome 13: 45,485,185-45,495,562 forward strand.

GRCz11:CM002897.2

About this gene

This gene has 5 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134730.3	tmem50a-203	1687	164aa	ENSDARP00000120219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803R8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000019774.7	tmem50a-201	1678	164aa	ENSDARP00000009902.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803R8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142381.2	tmem50a-204	582	150aa	ENSDARP00000116685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000188004.1	tmem50a-205	503	164aa	ENSDARP00000147889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803R8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133635.2	tmem50a-202	923	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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