Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: sgce ENSDARG00000012138

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Description

sarcoglycan, epsilon [Source:NCBI gene (formerly Entrezgene);Acc:368230]

Location

Chromosome 19: 41,038,668-41,069,701 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111982.4	sgce-201	1716	414aa	ENSDARP00000099762.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193142.1	sgce-204	1457	405aa	ENSDARP00000156933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151120.2	sgce-203	821	154aa	ENSDARP00000125827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000131865.3	sgce-202	695	122aa	ENSDARP00000113758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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