Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: pbxip1b ENSDARG00000011824

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Description

pre-B-cell leukemia homeobox interacting protein 1b [Source:NCBI gene (formerly Entrezgene);Acc:553293]

Location

Chromosome 16: 22,750,174-22,775,528 reverse strand.

GRCz11:CM002900.2

About this gene

This gene has 4 transcripts (splice variants), 69 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127570.4	pbxip1b-202	5603	852aa	ENSDARP00000110994.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6R0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125963.4	pbxip1b-201	1640	512aa	ENSDARP00000105812.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145585.2	pbxip1b-204	825	244aa	ENSDARP00000118285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141778.2	pbxip1b-203	528	132aa	ENSDARP00000121558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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