Gene: plod2 ENSDARG00000011821

Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:NCBI gene (formerly Entrezgene);Acc:100036767]

Location

GRCz11:CM002908.2

About this gene

This gene has 4 transcripts (splice variants), 207 orthologues, 7 paralogues and is associated with 41 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000005901.9	plod2-201	3370	754aa	ENSDARP00000012147.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4U7F9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000106488.2	plod2-202	3307	733aa	ENSDARP00000097266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4U7F8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128182.3	plod2-203	1190	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000140035.2	plod2-204	645	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary