Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: scamp2 ENSDARG00000010279

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Description

secretory carrier membrane protein 2 [Source:NCBI gene (formerly Entrezgene);Acc:406687]

Location

Chromosome 25: 3,015,676-3,034,668 reverse strand.

GRCz11:CM002909.2

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053405.6	scamp2-201	1887	326aa	ENSDARP00000053404.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZV08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148466.3	scamp2-203	1520	262aa	ENSDARP00000124098.1	Nonsense mediated decay	-	-
ENSDART00000148694.2	scamp2-204	777	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000148374.3	scamp2-202	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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