Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: sp3b ENSDARG00000007812

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Description

Sp3 transcription factor [Source:HGNC Symbol;Acc:HGNC:11208]

Location

Chromosome 6: 10,721,765-10,740,365 reverse strand.

GRCz11:CM002890.2

About this gene

This gene has 4 transcripts (splice variants), 211 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151484.3	sp3b-203	3386	649aa	ENSDARP00000126293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ITM2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000002247.8	sp3b-201	2163	637aa	ENSDARP00000017607.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDR8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000184567.1	sp3b-204	1986	661aa	ENSDARP00000156629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000150942.2	sp3b-202	1226	173aa	ENSDARP00000126014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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