Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ptpn18 ENSDARG00000006308

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Description

protein tyrosine phosphatase non-receptor type 18 [Source:NCBI gene (formerly Entrezgene);Acc:541324]

Location

Chromosome 8: 9,641,252-9,684,872 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 2 transcripts (splice variants), 74 orthologues and 55 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132158.2	ptpn18-201	2386	514aa	ENSDARP00000120732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TYG0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134952.2	ptpn18-202	464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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