Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: cthrc1b ENSDARG00000001971

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Description

collagen triple helix repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:18831]

Location

Chromosome 16: 47,454,586-47,483,142 reverse strand.

GRCz11:CM002900.2

About this gene

This gene has 4 transcripts (splice variants), 214 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147072.3	cthrc1b-201	886	233aa	ENSDARP00000117902.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P0H3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181240.1	cthrc1b-202	696	231aa	ENSDARP00000147333.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190549.1	cthrc1b-204	654	217aa	ENSDARP00000147131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190202.1	cthrc1b-203	477	158aa	ENSDARP00000147402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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