Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: sema6cb ENSDARG00000000189

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Description

semaphorin 6Cb [Source:NCBI gene (formerly Entrezgene);Acc:556743]

Location

Chromosome 16: 30,002,605-30,271,444 forward strand.

GRCz11:CM002900.2

About this gene

This gene has 3 transcripts (splice variants), 199 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160555.2	sema6cb-203	7420	1064aa	ENSDARP00000137144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3W9A6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000000198.10	sema6cb-201	3295	1064aa	ENSDARP00000000198.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3W9A6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135723.4	sema6cb-202	2089	638aa	ENSDARP00000118170.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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