Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PSMD4 ENSDARG00000101295

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Description

proteasome 26S subunit ubiquitin receptor, non-ATPase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-104]

Location

Chromosome 19: 10,871,601-10,881,508 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 3 transcripts (splice variants), 225 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160438.2	PSMD4-201	1392	372aa	ENSDARP00000138300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162793.2	PSMD4-203	678	203aa	ENSDARP00000133816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000169204.2	PSMD4-202	746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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