Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: actn4 ENSDARG00000099786

.

Description

actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]

Location

Chromosome 15: 43,398,317-43,510,872 forward strand.

GRCz11:CM002899.2

About this gene

This gene has 3 transcripts (splice variants), 37 orthologues and 61 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187688.1	actn4-203	2772	923aa	ENSDARP00000150996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QH30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000182528.1	actn4-202	4010	901aa	ENSDARP00000153540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SYE2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000172154.2	actn4-201	2736	901aa	ENSDARP00000132801.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9GX78	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

.

Summary

.

.