Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: si:dkey-14d8.1 ENSDARG00000095332

.

Description

si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]

Location

Chromosome 4: 5,362,909-5,371,639 reverse strand.

GRCz11:CM002888.2

About this gene

This gene has 6 transcripts (splice variants), 102 orthologues and 388 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150697.3	si:dkey-14d8.1-203	5928	784aa	ENSDARP00000125338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WER0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189559.1	si:dkey-14d8.1-206	2766	622aa	ENSDARP00000146071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184963.1	si:dkey-14d8.1-205	2219	661aa	ENSDARP00000150826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000133423.2	si:dkey-14d8.1-201	503	168aa	ENSDARP00000119291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000150788.2	si:dkey-14d8.1-204	349	94aa	ENSDARP00000125271.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145474.3	si:dkey-14d8.1-202	701	92aa	ENSDARP00000122558.2	Nonsense mediated decay	-	-

.

Summary

.

.