Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: si:dkey-164f24.2 ENSDARG00000089418

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Description

si:dkey-164f24.2 [Source:NCBI gene (formerly Entrezgene);Acc:566607]

Location

Chromosome 8: 32,481,577-32,497,815 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 5 transcripts (splice variants) and 4 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000176298.2	si:dkey-164f24.2-204	2937	443aa	ENSDARP00000143587.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y8V3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000183340.1	si:dkey-164f24.2-205	2883	425aa	ENSDARP00000146054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000122359.3	si:dkey-164f24.2-201	2006	440aa	ENSDARP00000110777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7M1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000168929.2	si:dkey-164f24.2-203	1605	339aa	ENSDARP00000134478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKX9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000163962.2	si:dkey-164f24.2-202	1167	340aa	ENSDARP00000134324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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