Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:ch211-157c3.4 ENSDARG00000087093

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Description

si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]

Location

Chromosome 3: 27,642,386-27,647,845 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 4 transcripts (splice variants), 85 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151625.3	si:ch211-157c3.4-203	1776	149aa	ENSDARP00000126137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151027.3	si:ch211-157c3.4-202	1127	149aa	ENSDARP00000126144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAA1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122031.3	si:ch211-157c3.4-201	754	149aa	ENSDARP00000109985.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAA1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151675.3	si:ch211-157c3.4-204	782	56aa	ENSDARP00000125685.1	Nonsense mediated decay	-	-

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Summary

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