Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SAMD11 ENSDARG00000077852

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Description

sterile alpha motif domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28706]

Location

Chromosome 23: 23,020,709-23,123,901 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 4 transcripts (splice variants), 196 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146463.3	SAMD11-201	4308	874aa	ENSDARP00000112558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6B2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189843.1	SAMD11-204	2130	709aa	ENSDARP00000152637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000132418.2	SAMD11-203	848	167aa	ENSDARP00000116307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146415.2	SAMD11-202	1054	171aa	ENSDARP00000118743.1	Nonsense mediated decay	-	-

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Summary

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