Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: clstn3 ENSDARG00000073883

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Description

calsyntenin 3 [Source:NCBI gene (formerly Entrezgene);Acc:555627]

Location

Chromosome 16: 12,102,336-12,173,647 reverse strand.

GRCz11:CM002900.2

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110567.6	clstn3-201	6932	969aa	ENSDARP00000104134.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000155935.3	clstn3-203	3190	956aa	ENSDARP00000128441.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PFP2 A0A9V2TXN1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142574.2	clstn3-202	840	280aa	ENSDARP00000120261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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