Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: WHRN ENSDARG00000068166

.

Description

whirlin [Source:HGNC Symbol;Acc:HGNC:16361]

Location

Chromosome 5: 28,999,474-29,122,834 reverse strand.

GRCz11:CM002889.2

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144802.3	WHRN-201	7982	946aa	ENSDARP00000119523.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R807	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000087197.6	WHRN-203	3400	886aa	ENSDARP00000081631.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000132726.3	WHRN-202	718	174aa	ENSDARP00000130359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

.

Summary

.

.