Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: appl1 ENSDARG00000060734

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Description

HESX homeobox 1 [Source:NCBI gene (formerly Entrezgene);Acc:30620]

Location

Chromosome 11: 42,600,731-42,635,440 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 4 transcripts (splice variants), 208 orthologues, 34 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000182753.1	appl1-203	4336	718aa	ENSDARP00000155589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000192028.1	appl1-204	3413	718aa	ENSDARP00000150187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000085868.6	appl1-202	2234	707aa	ENSDARP00000080303.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000076711.7	appl1-201	422	72aa	ENSDARP00000071182.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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