Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRAF7 ENSDARG00000060207

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Description

TNF receptor-associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2212]

Location

Chromosome 3: 35,608,385-35,634,727 forward strand.

GRCz11:CM002887.2

About this gene

This gene has 4 transcripts (splice variants), 205 orthologues, 13 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000193219.1	TRAF7-204	2308	665aa	ENSDARP00000154096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000132703.3	TRAF7-201	3410	639aa	ENSDARP00000119094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1U9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190995.1	TRAF7-203	3304	639aa	ENSDARP00000150464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1U9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143637.2	TRAF7-202	1284	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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