Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pdzd11 ENSDARG00000053194

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Description

PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]

Location

Chromosome 14: 33,264,303-33,268,494 forward strand.

GRCz11:CM002898.2

About this gene

This gene has 2 transcripts (splice variants), 223 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000075187.4	pdzd11-201	1486	142aa	ENSDARP00000069672.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WG12 Q6NXB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130680.5	pdzd11-202	1216	142aa	ENSDARP00000111909.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WG12 Q6NXB2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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