Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: tmed8 ENSDARG00000052390

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Description

transmembrane p24 trafficking protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-283]

Location

Chromosome 17: 45,136,353-45,155,181 reverse strand.

GRCz11:CM002901.2

About this gene

This gene has 5 transcripts (splice variants), 194 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155043.3	tmed8-201	3395	264aa	ENSDARP00000128367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q502M2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000185274.1	tmed8-204	5620	268aa	ENSDARP00000151645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QAR5	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000191147.1	tmed8-205	5159	264aa	ENSDARP00000151031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q502M2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000156786.3	tmed8-203	925	85aa	ENSDARP00000129674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000156212.2	tmed8-202	773	56aa	ENSDARP00000128289.1	Nonsense mediated decay	-	-

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Summary

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