Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: atp2b4 ENSDARG00000044902

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Description

ATPase plasma membrane Ca2+ transporting 4 [Source:NCBI gene (formerly Entrezgene);Acc:768304]

Location

Chromosome 11: 22,920,587-23,080,970 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 7 transcripts (splice variants), 225 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000127791.3	atp2b4-202	10382	1174aa	ENSDARP00000109303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000184859.1	atp2b4-206	7355	1174aa	ENSDARP00000147194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000193120.1	atp2b4-207	3656	1197aa	ENSDARP00000153564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000046122.9	atp2b4-201	3599	1178aa	ENSDARP00000046121.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167818.2	atp2b4-205	3563	1166aa	ENSDARP00000136538.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000167817.2	atp2b4-204	1024	341aa	ENSDARP00000130984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000129307.3	atp2b4-203	1976	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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