Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LOXL2 ENSDARG00000044074

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Description

lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]

Location

Chromosome 5: 27,434,601-27,490,499 forward strand.

GRCz11:CM002889.2

About this gene

This gene has 4 transcripts (splice variants), 211 orthologues, 28 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184129.1	LOXL2-203	6171	762aa	ENSDARP00000146651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1V4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185815.1	LOXL2-202	4884	762aa	ENSDARP00000157626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1V4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000064701.6	LOXL2-204	4613	762aa	ENSDARP00000064700.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1V4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144013.2	LOXL2-201	3555	762aa	ENSDARP00000118755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1V4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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