Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: trappc1 ENSDARG00000039005

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Description

trafficking protein particle complex subunit 1 [Source:NCBI gene (formerly Entrezgene);Acc:437015]

Location

Chromosome 23: 44,546,319-44,550,533 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 3 transcripts (splice variants), 182 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056935.4	trappc1-201	633	145aa	ENSDARP00000056934.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJL7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139088.3	trappc1-202	622	145aa	ENSDARP00000121929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJL7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139547.3	trappc1-203	661	39aa	ENSDARP00000115891.1	Nonsense mediated decay	-	-

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Summary

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