Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: GAD1 ENSDARG00000027419

.

Description

glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]

Location

Chromosome 6: 3,827,751-3,863,452 forward strand.

GRCz11:CM002890.2

About this gene

This gene has 6 transcripts (splice variants), 216 orthologues, 9 paralogues and is associated with 18 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122348.4	GAD1-201	3483	613aa	ENSDARP00000110348.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000179091.2	GAD1-205	4575	587aa	ENSDARP00000144468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUS3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000185273.1	GAD1-204	4512	566aa	ENSDARP00000157484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QPB1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000003008.8	GAD1-206	3404	587aa	ENSDARP00000024162.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZUS3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000138185.2	GAD1-203	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000140419.2	GAD1-202	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

.

Summary

.

.