Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: DTX3 ENSDARG00000025766

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Description

deltex E3 ubiquitin ligase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1640]

Location

Chromosome 23: 27,041,111-27,061,072 reverse strand.

GRCz11:CM002907.2

About this gene

This gene has 6 transcripts (splice variants), 176 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128718.3	DTX3-202	2449	384aa	ENSDARP00000110688.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QUJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000124482.4	DTX3-205	2585	360aa	ENSDARP00000107053.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3B638	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000187979.1	DTX3-206	1116	290aa	ENSDARP00000157663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4G0B5	-
ENSDART00000138751.3	DTX3-203	807	96aa	ENSDARP00000116069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142324.2	DTX3-204	614	53aa	ENSDARP00000115738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133249.2	DTX3-201	566	28aa	ENSDARP00000113198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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