Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: cntn5 ENSDARG00000021584

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Description

contactin 5 [Source:NCBI gene (formerly Entrezgene);Acc:327429]

Location

Chromosome 18: 42,150,947-42,395,161 reverse strand.

GRCz11:CM002902.2

About this gene

This gene has 4 transcripts (splice variants), 206 orthologues and 86 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000098641.5	cntn5-203	4037	1056aa	ENSDARP00000089412.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000098639.5	cntn5-202	3439	804aa	ENSDARP00000089410.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000034225.9	cntn5-201	1802	601aa	ENSDARP00000038528.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000124211.3	cntn5-204	1730	305aa	ENSDARP00000107091.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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