Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: hpca ENSDARG00000018397

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Description

hippocalcin [Source:NCBI gene (formerly Entrezgene);Acc:393696]

Location

Chromosome 19: 32,622,177-32,710,922 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000004034.8	hpca-201	2361	193aa	ENSDARP00000012565.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC34	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188185.1	hpca-205	3238	193aa	ENSDARP00000153855.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC34	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165006.3	hpca-204	3139	193aa	ENSDARP00000130908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC34	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131750.2	hpca-202	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000133896.2	hpca-203	213	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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