Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: kdm7aa ENSDARG00000018111

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Description

lysine (K)-specific demethylase 7Aa [Source:NCBI gene (formerly Entrezgene);Acc:321248]

Location

Chromosome 4: 22,484,830-22,519,525 reverse strand.

GRCz11:CM002888.2

About this gene

This gene has 4 transcripts (splice variants), 220 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123801.3	kdm7aa-202	841	188aa	ENSDARP00000111845.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000186258.1	kdm7aa-204	3094	837aa	ENSDARP00000147148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RKB3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000130409.3	kdm7aa-203	2628	875aa	ENSDARP00000104491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHD1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000002851.9	kdm7aa-201	1848	613aa	ENSDARP00000012964.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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