Gene: LTN1 ENSDARG00000003984

Description

listerin E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-091204-127]

Location

GRCz11:CM002894.2

About this gene

This gene has 2 transcripts (splice variants) and 212 orthologues.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000022170.9	LTN1-202	10673	1751aa	ENSDARP00000013392.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F4K2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000135890.2	LTN1-201	5898	1749aa	ENSDARP00000116512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

ID History

Stable ID

ENSDARG00000003984.10

Status

Current

Latest Version

Release: 114 (current)

Assembly: GRCz11

Database: danio_rerio_core_114_11

No associated IDs found