Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: upf1 ENSCCRG00000051892

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Description

UPF1 RNA helicase and ATPase [Source:ZFIN;Acc:ZDB-GENE-040426-2836]

Location

Primary_assembly CAJNDQ010000022.1: 1,693,816-1,715,820 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 212 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCCRT00000070643.2	upf1-204	4747	1100aa	ENSCCRP00000065172.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C1DKY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCCRT00000104490.2	upf1-205	4681	1078aa	ENSCCRP00000096280.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C1FSL0	-
ENSCCRT00000032444.2	upf1-203	4254	1039aa	ENSCCRP00000029895.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C1B9I2	-
ENSCCRT00000104489.2	upf1-201	4208	1084aa	ENSCCRP00000096279.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C1I448	-
ENSCCRT00000199091.1	upf1-202	4085	1043aa	ENSCCRP00000164297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9J8C3F7	-

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Summary

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