Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: pum2 ENSCCRG00000029135

.

Description

pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76]

Location

Primary_assembly CAJNDQ010000035.1: 23,805,945-23,890,805 reverse strand.

About this gene

This gene has 7 transcripts (splice variants), 198 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCCRT00000059044.2	pum2-203	5187	1201aa	ENSCCRP00000054478.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C1CVF3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCCRT00000170000.1	pum2-202	5172	1196aa	ENSCCRP00000148251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9J8B0M3	-
ENSCCRT00000153721.1	pum2-207	5142	1186aa	ENSCCRP00000111659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9J7XVP9	-
ENSCCRT00000111357.1	pum2-204	5118	1178aa	ENSCCRP00000150076.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9J8B5Y9	-
ENSCCRT00000112031.1	pum2-205	5106	1174aa	ENSCCRP00000109075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9J7XTQ0	-
ENSCCRT00000174199.1	pum2-201	5016	1093aa	ENSCCRP00000181095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9J8DMV8	-
ENSCCRT00000135932.1	pum2-206	4980	1132aa	ENSCCRP00000136504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9J7ZTZ6	-

.

Comparative Genomics

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data