Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRAF3 ENSPTRG00000006746

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Description

TNF receptor associated factor 3 [Source:VGNC Symbol;Acc:VGNC:12392]

Location

Chromosome 14: 88,108,841-88,192,109 forward strand.

Pan_tro_3.0:CM000328.3

About this gene

This gene has 4 transcripts (splice variants), 135 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000012430.6	TRAF3-203	1713	570aa	ENSPTRP00000011503.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q8Y3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000093635.1	TRAF3-201	7475	568aa	ENSPTRP00000065087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RK92 A0A6D2WN67	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000098549.1	TRAF3-202	2165	543aa	ENSPTRP00000067314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8QLL9 A0A6D2W9T3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000082195.1	TRAF3-204	1458	485aa	ENSPTRP00000091709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TR26 A0A6D2WYN6	-

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Summary

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