Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: COL9A1 ENSCPOG00000005651

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Description

collagen type IX alpha 1 chain [Source:UniProtKB Gene Name;Acc:H0V5Z1]

Location

Scaffold DS562859.1: 55,653,682-55,740,262 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 238 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCPOT00000033068.1	COL9A1-201	3966	921aa	ENSCPOP00000028042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286XRX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCPOT00000005712.3	COL9A1-202	2043	680aa	ENSCPOP00000005094.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0V5Z1	-

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Summary

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