Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMG1 ENSCJAG00000020006

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Description

SMG1 nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]

Location

Primary_assembly 12: 18,042,745-18,152,027 reverse strand.

mCalJac1.pat.X:CM021926.1

About this gene

This gene has 4 transcripts (splice variants), 231 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000058641.3	SMG1-201	11314	3660aa	ENSCJAP00000045584.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6S837	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000094782.2	SMG1-202	11194	3620aa	ENSCJAP00000077484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4WIN1	-
ENSCJAT00000052547.3	SMG1-203	1824	607aa	ENSCJAP00000043448.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7IA80	-
ENSCJAT00000058594.4	SMG1-204	588	196aa	ENSCJAP00000046487.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7IK77	-

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Summary

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