Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDLIM5 ENSCJAG00000006882

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Description

PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:HGNC:17468]

Location

Primary_assembly 3: 99,022,534-99,250,028 reverse strand.

mCalJac1.pat.X:CM021917.1

About this gene

This gene has 10 transcripts (splice variants), 285 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000124523.1	PDLIM5-206	2225	692aa	ENSCJAP00000085031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3WH62	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000136807.1	PDLIM5-207	2210	687aa	ENSCJAP00000089964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3WA47	-
ENSCJAT00000143055.1	PDLIM5-208	2192	681aa	ENSCJAP00000093334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3XCX6	-
ENSCJAT00000113508.2	PDLIM5-202	2179	615aa	ENSCJAP00000077041.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4WH70	-
ENSCJAT00000013496.5	PDLIM5-205	2171	565aa	ENSCJAP00000012805.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PY39	-
ENSCJAT00000013469.5	PDLIM5-209	2093	648aa	ENSCJAP00000012781.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R5M2	-
ENSCJAT00000072440.3	PDLIM5-210	2090	647aa	ENSCJAP00000057633.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8MCX9	-
ENSCJAT00000013512.5	PDLIM5-204	2072	593aa	ENSCJAP00000012820.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PX72	-
ENSCJAT00000066907.3	PDLIM5-203	2047	571aa	ENSCJAP00000058270.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8N2L0	-
ENSCJAT00000077995.3	PDLIM5-201	2039	630aa	ENSCJAP00000054989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8M7D7	-

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Summary

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