Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HDAC9 ENSCJAG00000001076

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Description

histone deacetylase 9 [Source:HGNC Symbol;Acc:HGNC:14065]

Location

Primary_assembly 8: 36,722,455-37,380,425 reverse strand.

mCalJac1.pat.X:CM021922.1

About this gene

This gene has 10 transcripts (splice variants), 234 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000092095.2	HDAC9-201	3440	1096aa	ENSCJAP00000068919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4VVA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000107553.2	HDAC9-205	5232	1036aa	ENSCJAP00000077903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4WJJ6	-
ENSCJAT00000002062.5	HDAC9-202	3359	1069aa	ENSCJAP00000001947.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XPY2	-
ENSCJAT00000110907.2	HDAC9-204	3266	986aa	ENSCJAP00000078100.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4WKG3	-
ENSCJAT00000057415.4	HDAC9-203	3227	1025aa	ENSCJAP00000045141.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6SA28	-
ENSCJAT00000099580.2	HDAC9-206	3068	972aa	ENSCJAP00000068353.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4VS41	-
ENSCJAT00000111760.2	HDAC9-207	2808	552aa	ENSCJAP00000068207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4VRR2	-
ENSCJAT00000002047.5	HDAC9-208	2057	604aa	ENSCJAP00000001932.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XQL9	-
ENSCJAT00000055818.3	HDAC9-209	1938	645aa	ENSCJAP00000050480.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7H3I3	-
ENSCJAT00000061221.3	HDAC9-210	1764	587aa	ENSCJAP00000048600.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6U8V5	-

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Summary

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