Transcript: ZK593.4a.1 rbr-2-201

Description

Lysine-specific demethylase rbr-2;[histone H3]-trimethyl-L-lysine(4) demethylase [Source:NCBI gene (formerly Entrezgene);Acc:177985]

Location

About this transcript

This transcript has 10 exons, is annotated with 40 domains and features and maps to 87 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ZK593.4a.1	rbr-2-201	5098	1477aa	ZK593.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q23541	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ZK593.4b.1	rbr-2-202	5080	1444aa	ZK593.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A061ACP3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 5,098 bps, Translation length: 1,477 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q23541

Version

ZK593.4a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase