Transcript: Y48G8AL.1a.1 herc-1-201

Description

HECT domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:171700]

Location

Chromosome I: 1,211,485-1,254,719 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 35 domains and features and maps to 74 oligo probes.

Gene

This transcript is a product of gene WBGene00021685 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y48G8AL.1a.1	herc-1-201	3290	1019aa	Y48G8AL.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BL11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Y48G8AL.1a.2	herc-1-202	3283	1019aa	Y48G8AL.1a.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9BL11	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Y48G8AL.1b.1	herc-1-203	2067	688aa	Y48G8AL.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RY72	-
Y48G8AL.1c.1	herc-1-204	1932	643aa	Y48G8AL.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RS03	-
Y48G8AL.1d.1	herc-1-205	1515	504aa	Y48G8AL.1d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6RTM2	-
Y48G8AL.1e.1	herc-1-206	642	213aa	Y48G8AL.1e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	W6SBJ0	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,290 bps, Translation length: 1,019 residues

Version

Y48G8AL.1a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: Y48G8AL.1a.1 herc-1-201

Summary

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Transcript: Y48G8AL.1a.1 herc-1-201

Summary

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