Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
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- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
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Transcript: Y47D3B.11.1 plr-1-201

Description

putative E3 ubiquitin-protein ligase plr-1 [Source:NCBI gene (formerly Entrezgene);Acc:176575]

Location

About this transcript

This transcript has 6 exons, is annotated with 24 domains and features and maps to 56 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y47D3B.11.1	plr-1-201	1890	487aa	Y47D3B.11.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9U2B7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,890 bps, Translation length: 487 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9U2B7

Version

Y47D3B.11.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase