Summary
Sequence
Protein Information
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- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
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Transcript: Y39A1C.2.1 oxi-1-201

Description

HECT domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:176515]

Location

About this transcript

This transcript has 13 exons and is annotated with 11 domains and features.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
Y39A1C.2.1	oxi-1-201	3310	1066aa	Y39A1C.2.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9XXE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,310 bps, Translation length: 1,066 residues

Version

Y39A1C.2.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase