Transcript: T28B4.1b.1 fbxl-4-202

Description

F-box domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:180930]

Location

Chromosome X: 6,590,194-6,596,135 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 10 domains and features.

Gene

This transcript is a product of gene WBGene00020884 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
T28B4.1c.1	fbxl-4-201	1841	552aa	T28B4.1c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6A590	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
T28B4.1b.1	fbxl-4-202	1813	518aa	T28B4.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZV3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
T28B4.1a.1	fbxl-4-203	1756	535aa	T28B4.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2KZV2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,813 bps, Translation length: 518 residues

Version

T28B4.1b.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

Transcript: T28B4.1b.1 fbxl-4-202

Summary

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Transcript: T28B4.1b.1 fbxl-4-202

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