Transcript: R11A8.4a.1 sir-2.1-201

Description

Deacetylase sirtuin-type domain-containing protein;NAD-dependent protein deacetylase sir-2.1 [Source:NCBI gene (formerly Entrezgene);Acc:177924]

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
R11A8.4a.1	sir-2.1-201	2033	607aa	R11A8.4a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21921	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
R11A8.4b.1	sir-2.1-202	1734	577aa	R11A8.4b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3YT50	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,033 bps, Translation length: 607 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q21921

Version

R11A8.4a.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase